Buiding Stack on Mac

1

Could you please open up the access to this file Minimum steps for working with JEDI natively on Mac OS to the public? Thank you!

2

Hi, you can view this file on the JCSDA public repo:

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3

Thank you for the response!

4

Just want to warn you that this page is severely out of date. It refers to jedi-stack which is a methodology that we dropped over a year ago (and is replaced with spack-stack). Apologies for the state of the instructions, but I would recommend ignoring these.

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5

The more up-to-date instructions are here: 6. Generating new site configs — spack-stack develop documentation

But there are still a few updates that need to be made for installing the spack-stack-1.8.0 release. As far as I know, though, the instructions for installing version 1.7.0 should be good.

6

More specifically for working with JEDI (after installing the spack-stack), the instructions are here:Building and compiling JEDI — JEDI Documentation 8.0.0 documentation

7

Thank you for the heads up! I’ve just moved onto spack-stack.

8

Thanks for the follow up and information!

9

I switched to spack stack, but kept seeing the error message of “1. cannot satisfy a requirement for package ‘py-cython’ with the skylab-dev template.” at the step of “spack concretize 2>&1 | tee log.concretize”. The same issue is showing up on both my mac and linux server. Do you happen to know how this may be fixed? Thank you!

==> [2024-09-27-10:33:59.257401] Ordered hashes [py-cython]: py-cython/478/c4369ad83acb291c91f8aee9117154ac2e54cf81c906a6eeee7a2156be82112b
==> [2024-09-27-10:33:59.257613] Ordered hashes [python]: python/12/f2fd060afc4b4618fe8104c4c5d771f36dc55b1db5a4623785a4ea707ec72fb4, python/13/b0615b2fc96bb0cf7f180b107183b194b83b34c7614dcd6121e4a76bbf168155, python/18/13fa8bfa3e852cbf2e7b02a0313009df484bb39f55a50ada00e1a5599e956ac9, python/19/ebdca648c9c1d25f586d7e2a495b62e6d91973b55264a13d89eda1beff72ef56
==> [2024-09-27-10:33:59.258292] Ordered hashes [py-numpy]: py-numpy/541/873745d7b547857fcfec9cae90b09c133b42a4f0c23b6c2d84cf37e2dd816604
==> [2024-09-27-10:35:11.251009] UnsatisfiableSpecError: concretization failed for the following reasons:

   1. cannot satisfy a requirement for package 'py-cython'.
==> [2024-09-27-10:35:11.251091] Error: concretization failed for the following reasons:

   1. cannot satisfy a requirement for package 'py-cython'.
Traceback (most recent call last):
  File "xtian/repos/spack-stack/spack/lib/spack/spack/main.py", line 1069, in main
    return _main(argv)
  File "xtian/repos/spack-stack/spack/lib/spack/spack/main.py", line 1022, in _main
    return finish_parse_and_run(parser, cmd_name, args, env_format_error)
  File "xtian/repos/spack-stack/spack/lib/spack/spack/main.py", line 1052, in finish_parse_and_run
    return _invoke_command(command, parser, args, unknown)
  File "xtian/repos/spack-stack/spack/lib/spack/spack/main.py", line 649, in _invoke_command
    return_val = command(parser, args)
  File "xtian/repos/spack-stack/spack/lib/spack/spack/cmd/concretize.py", line 44, in concretize
    concretized_specs = env.concretize(force=args.force, tests=tests)
  File "xtian/repos/spack-stack/spack/lib/spack/spack/environment/environment.py", line 1444, in concretize
    return self._concretize_together_where_possible(tests=tests)
  File "xtian/repos/spack-stack/spack/lib/spack/spack/environment/environment.py", line 1534, in _concretize_together_where_possible
    for result in solver.solve_in_rounds(
  File "xtian/repos/spack-stack/spack/lib/spack/spack/solver/asp.py", line 3868, in solve_in_rounds
    result, _, _ = self.driver.solve(
  File "xtian/repos/spack-stack/spack/lib/spack/spack/solver/asp.py", line 894, in solve
    error_handler.raise_if_errors()
  File "xtian/repos/spack-stack/spack/lib/spack/spack/solver/asp.py", line 748, in raise_if_errors
    raise UnsatisfiableSpecError(msg)
spack.solver.asp.UnsatisfiableSpecError: concretization failed for the following reasons:

   1. cannot satisfy a requirement for package 'py-cython'.