Saber compile problems

JEDI
1

I am having compile problems with the develop branch of saber of the type:

/usr/bin/ld: …/…/lib/libsaber.so: undefined reference to `atlas::grid::detail::partitioner::TransPartitioner::TransPartitioner()’

This happens with atlas version 0.38.0 and 0.40.0, and also develop. Which atlas version are you using for testing/running? This is for the gcc 12.3.1 compiler suite

1 Like
2

Hi Mark, I’m pretty sure our testing is running spack-stack 1.7 which has atlas version 0.36.0; I use spack-stack 1.8 which has atlas 0.38.1 and both seem to work. What version of the ectrans package are you using? (both the most recent spack-stacks have ectrans 1.2.0).

1 Like
3

Thanks @ncrossette for the quick response. I don’t have ectrans - could that be the problem? I can install it now

4

Yes, I think that is the issue. I’m pretty sure your missing TransPartitioner is in the ectrans package

5

I’m using my own version of spack and it doesn’t know about ectrans. Can I install it manually? I don’t see it on ecmwf github

6

Never mind - found it: GitHub - ecmwf-ifs/ectrans: Global spherical harmonics transforms library underpinning the IFS

1 Like
7

Yes - thanks again @ncrossette - that was indeed the problem. I installed ectrans and fiat and now it compiles